euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

160 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip977 chr1 57711299 57711299 - unknown germline . no 346 DAB1
srip1315 chr1 67544680 67544680 + unknown germline . yes 346 .
srip2712 chr1 101978967 101978967 - unknown germline . no 346 .
srip4599 chr1 164239531 164239531 + unknown germline . no 346 .
srip4903 chr1 169524846 169524846 + unknown germline . no 346 F5
srip5698 chr1 189686334 189686334 + unknown germline . no 346 .
srip6191 chr1 194934626 194934626 - unknown germline . no 346 .
srip6569 chr1 220378213 220378213 - unknown germline . no 346 RAB3GAP2
srip7102 chr1 231079125 231079125 + unknown germline . no 346 TTC13
srip8253 chr10 25707676 25707676 - unknown germline . no 346 GPR158
srip8735 chr10 33315318 33315318 - unknown germline . no 346 LOC100505562
srip9501 chr10 68803675 68803675 + unknown germline . no 346 LRRTM3;CTNNA3
srip10130 chr10 87505368 87505368 - unknown germline . no 346 GRID1
srip10943 chr10 110453451 110453451 + unknown germline . no 346 .
srip12068 chr11 1112673 1112673 - unknown germline . no 346 .
srip12405 chr11 15380235 15380235 + unknown germline . no 346 .
srip13456 chr11 33670111 33670111 + unknown germline . no 346 C11orf41
srip15613 chr11 60364495 60364495 - unknown germline . no 346 .
srip15970 chr11 72760551 72760551 + unknown germline . no 346 FCHSD2
srip16237 chr11 79917402 79917402 + unknown germline . yes 346 .
srip17536 chr11 104556111 104556111 - unknown germline . no 346 .
srip18734 chr11 134305626 134305626 - unknown germline . no 346 .
srip19979 chr12 12933660 12933660 - unknown germline . no 346 APOLD1
srip21211 chr12 34276519 34276519 - unknown germline . no 346 .
srip21376 chr12 34346159 34346159 + unknown germline . no 346 .
srip21588 chr12 34661714 34661714 + unknown germline . no 346 .
srip21953 chr12 43125233 43125233 - unknown germline . no 346 .
srip22605 chr12 47873142 47873142 + unknown germline . no 346 .
srip23721 chr12 77861659 77861659 - unknown germline . no 346 .
srip25697 chr12 118057334 118057334 - unknown germline . no 346 KSR2
srip25850 chr12 118186914 118186914 + unknown germline . no 346 KSR2
srip27697 chr13 37724174 37724174 + unknown germline . no 346 .
srip28099 chr13 48266680 48266680 + unknown germline . no 346 .
srip28298 chr13 55237995 55237995 + unknown germline . no 346 .
srip28403 chr13 58556519 58556519 + unknown germline . no 346 .
srip28765 chr13 61462321 61462321 - unknown germline . no 346 .
srip29290 chr13 61734471 61734471 + unknown germline . no 346 .
srip29810 chr13 65549212 65549212 - unknown germline . no 346 .
srip30012 chr13 67084854 67084854 - unknown germline . no 346 PCDH9
srip30538 chr13 78055067 78055067 + unknown germline . no 346 .
srip30726 chr13 79259770 79259770 - unknown germline . no 346 .
srip31260 chr13 85871588 85871588 - unknown germline . no 346 .
srip32554 chr13 96116756 96116756 - unknown germline . no 346 CLDN10
srip32904 chr13 97421625 97421625 + unknown germline . no 346 HS6ST3
srip33065 chr13 101391109 101391109 + unknown germline . no 346 .
srip33256 chr13 104296211 104296211 - unknown germline . no 346 .
srip34505 chr14 26581534 26581534 - unknown germline . no 346 .
srip34657 chr14 28116812 28116812 + unknown germline . no 346 LOC728755
srip34899 chr14 28301203 28301203 + unknown germline . no 346 .
srip37450 chr14 60617378 60617378 - unknown germline . no 346 DHRS7
srip38217 chr14 72333675 72333675 - unknown germline . no 346 .
srip39382 chr15 34031826 34031826 - unknown germline . no 346 RYR3
srip40003 chr15 47507319 47507319 - unknown germline . no 346 SEMA6D
srip40889 chr15 53956090 53956090 + unknown germline . no 346 WDR72
srip41873 chr15 71388519 71388519 - unknown germline . no 346 .
srip42993 chr15 98622467 98622467 + unknown germline . no 346 .
srip43690 chr16 6987037 6987037 + unknown germline . no 346 RBFOX1
srip44242 chr16 20365406 20365406 - unknown germline . no 346 .
srip45354 chr16 33992419 33992419 + unknown germline . no 346 .
srip46883 chr17 22150203 22150203 - unknown germline . no 346 .
srip47071 chr17 28398292 28398292 + unknown germline . no 346 EFCAB5
srip47982 chr17 61281439 61281439 - unknown germline . no 346 TANC2
srip48017 chr17 61404763 61404763 + unknown germline . no 346 TANC2
srip49096 chr18 27219174 27219174 - unknown germline . no 346 .
srip49271 chr18 28732884 28732884 - unknown germline . no 346 DSC1
srip50470 chr18 51762718 51762718 - unknown germline . no 346 .
srip51712 chr18 74960050 74960050 - unknown germline . no 346 .
srip55251 chr2 69168887 69168887 - unknown germline . no 346 .
srip55398 chr2 72413315 72413315 - unknown germline . no 346 EXOC6B
srip55765 chr2 79929362 79929362 + unknown germline . no 346 CTNNA2
srip56351 chr2 83188313 83188313 + unknown germline . no 346 .
srip57080 chr2 108901173 108901173 - unknown germline . no 346 .
srip58000 chr2 141774965 141774965 - unknown germline . no 346 LRP1B
srip58750 chr2 147020911 147020911 + unknown germline . no 346 .
srip60579 chr2 182473910 182473910 + unknown germline . no 346 CERKL
srip62014 chr2 221503739 221503739 - unknown germline . no 346 .
srip62761 chr20 6106047 6106047 - unknown germline . no 346 .
srip63750 chr20 21148878 21148878 - unknown germline . no 346 PLK1S1
srip65693 chr21 19517286 19517286 - unknown germline . no 346 .
srip67986 chr22 29007687 29007687 - unknown germline . yes 346 TTC28
srip68334 chr22 41019372 41019372 - unknown germline . no 346 MKL1
srip70579 chr3 21800856 21800856 + unknown germline . no 346 .
srip71299 chr3 30419354 30419354 - unknown germline . no 346 .
srip71731 chr3 38626054 38626054 + unknown germline . no 346 SCN5A
srip72225 chr3 55010457 55010457 + unknown germline . no 346 CACNA2D3
srip72905 chr3 59852877 59852877 + unknown germline . no 346 FHIT
srip75148 chr3 84593258 84593258 - unknown germline . no 346 .
srip75643 chr3 85663337 85663337 - unknown germline . no 346 CADM2
srip77944 chr3 139634686 139634686 - unknown germline . no 346 .
srip80515 chr3 180877922 180877922 + unknown germline . no 346 .
srip80998 chr3 184677979 184677979 - unknown germline . no 346 VPS8
srip81894 chr3 193354152 193354152 - unknown germline . no 346 OPA1
srip84368 chr4 45890702 45890702 - unknown germline . no 346 .
srip85311 chr4 57497040 57497040 - unknown germline . no 346 .
srip86454 chr4 68282406 68282406 - unknown germline . no 346 .
srip87524 chr4 81242092 81242092 - unknown germline . no 346 .
srip87777 chr4 85317446 85317446 - unknown germline . no 346 .
srip87960 chr4 88461091 88461091 - unknown germline . no 346 .
srip88457 chr4 103043669 103043669 - unknown germline . no 346 .
srip89512 chr4 110248303 110248303 - unknown germline . no 346 .
srip90589 chr4 118332385 118332385 - unknown germline . no 346 .
srip91133 chr4 127275358 127275358 + unknown germline . no 346 .
srip91684 chr4 132357338 132357338 + unknown germline . no 346 .
srip92396 chr4 138177310 138177310 + unknown germline . no 346 .
srip93478 chr4 153061908 153061908 - unknown germline . no 346 .
srip94219 chr4 167476673 167476673 - unknown germline . no 346 .
srip94590 chr4 172560589 172560589 + unknown germline . no 346 .
srip94738 chr4 177308485 177308485 - unknown germline . no 346 .
srip96533 chr5 15913061 15913061 + unknown germline . no 346 FBXL7
srip97307 chr5 29576313 29576313 - unknown germline . no 346 .
srip97411 chr5 33633321 33633321 - unknown germline . no 346 ADAMTS12
srip98913 chr5 52575618 52575618 + unknown germline . no 346 .
srip99219 chr5 67191247 67191247 + unknown germline . no 346 .
srip99384 chr5 68263449 68263449 - unknown germline . no 346 .
srip100891 chr5 96866396 96866396 + unknown germline . no 346 .
srip102408 chr5 109567514 109567514 + unknown germline . no 346 .
srip103063 chr5 125012524 125012524 - unknown germline . no 346 .
srip106168 chr5 177401287 177401287 + unknown germline . no 346 .
srip106803 chr6 12237456 12237456 - unknown germline . no 346 .
srip108023 chr6 32589537 32589537 + unknown germline . no 346 .
srip108412 chr6 46310275 46310275 + unknown germline . no 346 .
srip108909 chr6 56729287 56729287 - unknown germline . no 346 LOC100652827
srip109234 chr6 62482852 62482852 + unknown germline . no 346 KHDRBS2
srip110300 chr6 73716067 73716067 + unknown germline . no 346 KCNQ5
srip111526 chr6 89122014 89122014 - unknown germline . no 346 .
srip111850 chr6 91669497 91669497 - unknown germline . no 346 .
srip115872 chr6 163113050 163113050 - unknown germline . no 346 PARK2
srip116477 chr7 24412231 24412231 + unknown germline . no 346 .
srip116576 chr7 26794895 26794895 + unknown germline . no 346 SKAP2
srip117274 chr7 52789428 52789428 + unknown germline . no 346 .
srip119017 chr7 76919295 76919295 + unknown germline . no 346 CCDC146
srip119248 chr7 82030907 82030907 - unknown germline . no 346 CACNA2D1
srip119429 chr7 84329721 84329721 + unknown germline . no 346 .
srip119995 chr7 85044725 85044725 + unknown germline . no 346 .
srip120910 chr7 95000554 95000554 - unknown germline . no 346 PON3
srip122764 chr7 127603391 127603391 + unknown germline . no 346 SND1
srip123857 chr8 4345013 4345013 - unknown germline . no 346 CSMD1
srip124619 chr8 8334290 8334290 - unknown germline . yes 346 .
srip125305 chr8 24926529 24926529 - unknown germline . no 346 .
srip126166 chr8 56620569 56620569 - unknown germline . no 346 .
srip126501 chr8 64686904 64686904 - unknown germline . no 346 LOC286184
srip127080 chr8 72399210 72399210 - unknown germline . no 346 .
srip129060 chr8 115788554 115788554 - unknown germline . no 346 .
srip129252 chr8 115881756 115881756 + unknown germline . no 346 .
srip130546 chr9 4265391 4265391 + unknown germline . no 346 GLIS3
srip131770 chr9 20063550 20063550 - unknown germline . no 346 .
srip131966 chr9 29114733 29114733 - unknown germline . no 346 .
srip132292 chr9 30495867 30495867 - unknown germline . no 346 .
srip132444 chr9 30674437 30674437 - unknown germline . no 346 .
srip132783 chr9 32092721 32092721 - unknown germline . no 346 .
srip133010 chr9 32463872 32463872 - unknown germline . no 346 DDX58
srip136233 chrX 4659582 4659582 - unknown germline . no 346 .
srip136643 chrX 21333092 21333092 + unknown germline . no 346 .
srip137680 chrX 58482468 58482468 - unknown germline . no 346 .
srip138126 chrX 63516573 63516573 + unknown germline . no 346 MTMR8
srip138628 chrX 74988473 74988473 + unknown germline . no 346 .
srip138831 chrX 75949527 75949527 - unknown germline . no 346 .
srip139641 chrX 98264276 98264276 - unknown germline . no 346 .
srip140202 chrX 108161889 108161889 - unknown germline . no 346 .
srip141851 chrX 140515246 140515246 - unknown germline . no 346 .